Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944565.1_cds_XP_016487349.1_78093
CDS Infomation

[gene=LOC107807465] [db_xref=GeneID:107807465] [protein=metal transporter Nramp2-like] [protein_id=XP_016487349.1] [location=complement(join(55936..56160,57682..58334,58437..58573,59329..59942))] [gbkey=CDS]
Sequence

ATGAGCTCACCTCCACAACAACAAAATACACCCTCGGATTCCAAAGACGAAGAATCCCGC
CACCTCCTTAGTACCTCTCTGCCGCAATCAACGTCGCCGTTAATTAACGGTTATGCTGAT
GATGACAGCGAAGAAGAAGAATTCGCGTACGGATCTGGAGAGAAGATCCACATCGTTGAT
TTCGATTCAGAACCGATCGACGGTGTTGATTACAGCACGGTACCTCCATTTTCATGGAAG
AAACTGTGGCAGTTTACGGGTCCTGGATTCTTAATGAGCATAGCTTTTTTGGATCCGGGG
AATTTGGAAGGAGATCTACAAGCTGGAGCAATAGCGGGTTACTCGCTTCTGTGGCTGTTG
TTATGGGCCACTGTTATGGGCCTGTTGATCCAGTTACTGTCGGCGAGAATAGGCGTTGCA
ACGGGCCGGCACTTGGCGGAGCTTTGCCGGGAAGAGTATCCTAAATGGGCTGGGCTTTTA
CTATGGTTCATGGCTGAGGTGGCTCTGATTGGAGCCGATATTCAGGAAGTTATAGGAAGT
GCAATTGCAATTAAGATACTCAGTCGTGGGGTTTTACCACTTTGGGCTGGTGTGCTTATT
ACTGCTTCTGATTGCTTTCTTCTTTTGGTTCTTGAGAACTATGGAATAAGGAAGTTAGAA
GCTGTTTTTGCTGTTCTTATTTCGACTATGGCACTGTCCTTTGCTTGGATGTTTGGAGAT
GCTAAACCAAGTGGAAAGGAGCTTCTAGCAGGTCTCTTGATTCCAAAACTCAGTTCAAGG
ACAGTTCGGCAGGCTGTTGGAGTAGTTGGTTGTGTAATAATGCCTCACAATGTATTCTTG
CATTCAGCTTTGGTTCAATCCAGAGAGATTGATACGAAGAAAAAAGGGCAGGTTCAAGAG
GCATTGAATTACTACTCAATAGAATGCTCCTTTGCCCTTCTTGTCTCCTTTATTATCAAT
TTGTTTGTTACAACTGTCTTCGCCAAGGGATTCTATGGAAGTGAGCAAGCTAGTAGTTTA
GGCCTTGTAAATGCAGGGCAGTATCTTCAGGATAAGTATGGTGGGGGAATGTTTCCAATC
CTCTATATTTGGGGTATTGGATTATTGGCAGCCGGACAGAGCAGTACAATAACCGGTACT
TATGCTGGACAGTTTATCATGGGAGGTTTTCTAGATCTACGTTTGAAGAAATGGCTTAGG
GCGCTGATTACTCGAAGTTGTGCTATTGTGCCAACAATAATTGTTGCTCTGATTTTCAAT
AGGACTGAATCATCACTCGACGTTTTGAATGAGTGGCTTAATGTGCTTCAGTCTATACAG
ATCCCTTTTGCGCTTATACCCCTTCTGACATTGGTGTCCAAGGAGGAGTTAATGGGTGTT
TTCAAAATTGGGCCTACTCTCGAGAGAGTTGCATGGACTGTTGCTGCACTAGTGATGGTG
ATAAATGGCTATCTTTTGCTGGACTTCGTTATCTCTGAGGTCAACGGGCTGCTGTTTGCT
TTTCTGGTCTGTGCTGGGACTGCAGGTTATATTGCTTTCATTTTGTACCTCATTTCACAT
GGTGGTGGCAATGTTGCCAATTGGTTCAACCTACTCCGCACAAAAGGATATAGCTATGCT
GGTCAATGA

Peptide Sequence

PEP ID

XP_016487349.1
PEP Infomation

PREDICTED: metal transporter Nramp2-like [Nicotiana tabacum]
Sequence

MSSPPQQQNTPSDSKDEESRHLLSTSLPQSTSPLINGYADDDSEEEEFAYGSGEKIHIVD
FDSEPIDGVDYSTVPPFSWKKLWQFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLL
LWATVMGLLIQLLSARIGVATGRHLAELCREEYPKWAGLLLWFMAEVALIGADIQEVIGS
AIAIKILSRGVLPLWAGVLITASDCFLLLVLENYGIRKLEAVFAVLISTMALSFAWMFGD
AKPSGKELLAGLLIPKLSSRTVRQAVGVVGCVIMPHNVFLHSALVQSREIDTKKKGQVQE
ALNYYSIECSFALLVSFIINLFVTTVFAKGFYGSEQASSLGLVNAGQYLQDKYGGGMFPI
LYIWGIGLLAAGQSSTITGTYAGQFIMGGFLDLRLKKWLRALITRSCAIVPTIIVALIFN
RTESSLDVLNEWLNVLQSIQIPFALIPLLTLVSKEELMGVFKIGPTLERVAWTVAALVMV
INGYLLLDFVISEVNGLLFAFLVCAGTAGYIAFILYLISHGGGNVANWFNLLRTKGYSYA
GQ

Transcript Sequence

Gene sequence data has not been registered.